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Soybean GWAS for protein and oil
Genome-wide SNPs in 298 soybean accessions associate with seed protein and oil content.
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QC SNP count?
31,954.
Source: A genome-wide association study of seed protein and oil content in soybean · DOI · quote verified
Accessions?
298.
Source: A genome-wide association study of seed protein and oil content in soybean · DOI · quote verified
Euchromatic r²=0.2?
About 360 Kbp.
Source: A genome-wide association study of seed protein and oil content in soybean · DOI · quote verified
Protein range?
35–50%.
Source: A genome-wide association study of seed protein and oil content in soybean · DOI · quote verified
Design?
GWAS in soybean germplasm.
Source: A genome-wide association study of seed protein and oil content in soybean · DOI · quote verified
LD contrast?
Much slower decay in heterochromatin.
Source: A genome-wide association study of seed protein and oil content in soybean · DOI · quote verified
Trait focus?
Seed protein and oil.
Source: A genome-wide association study of seed protein and oil content in soybean · DOI · quote verified
Population structure SNPs?
42,368 SNPs for K estimation.
Source: A genome-wide association study of seed protein and oil content in soybean · DOI · quote verified
Limit?
Association ≠ proven causality.
Source: A genome-wide association study of seed protein and oil content in soybean · DOI · quote verified
Takeaway?
Genome-wide markers map seed composition QTLs.
Source: A genome-wide association study of seed protein and oil content in soybean · DOI · quote verified