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PROTAC THNAN69 degrades LIMK2, not LIMK1

A cereblon-recruiting degrader based on LIMKi3 and a phenyl dihydrouracil ligand wipes out LIMK2 at nanomolar DC50 while leaving LIMK1 and phospho-cofilin largely intact.

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What isoform-selective tool did the authors develop?

A LIMK2-specific PROTAC degrader (THNAN69).

Source: Discovery and Development of a Potent LIMK2 Isoform-Specific Degrader · DOI · quote verified

What CRBN ligand replaced thalidomide, and why?

Phenyl dihydrouracil, to boost degradation potency and cut neo-substrate degradation.

Source: Discovery and Development of a Potent LIMK2 Isoform-Specific Degrader · DOI · quote verified

What DC50s were measured in the EGFP–LIMK2 assay?

33 nM (21b), 13.7 nM (22c), 1 nM (THNAN69).

Source: Discovery and Development of a Potent LIMK2 Isoform-Specific Degrader · DOI · quote verified

At what concentration is endogenous LIMK2 nearly gone with THNAN69 vs 21b?

10 nM versus 100 nM.

Source: Discovery and Development of a Potent LIMK2 Isoform-Specific Degrader · DOI · quote verified

How selective was THNAN69 in a proteome-wide kinase sense?

LIMK2 was the only kinase selectively degraded (500 nM, 6 h, HuCCT1).

Source: Discovery and Development of a Potent LIMK2 Isoform-Specific Degrader · DOI · quote verified

How did VHL PROTACs compare in cells?

Poor target engagement and poor cell penetrance versus CRBN analogues.

Source: Discovery and Development of a Potent LIMK2 Isoform-Specific Degrader · DOI · quote verified

Does LIMK2 degradation collapse phospho-cofilin?

No—pCFL stays up, consistent with LIMK1 compensation.

Source: Discovery and Development of a Potent LIMK2 Isoform-Specific Degrader · DOI · quote verified

What NanoBRET IC50 did THNAN69 show on LIMK2 vs LIMK1?

80 nM, five-fold stronger than LIMK1.

Source: Discovery and Development of a Potent LIMK2 Isoform-Specific Degrader · DOI · quote verified

What control showed CRBN/CRL dependence?

No degradation with neddylation inhibitor or N-methyl inactive THNAN69-NC.

Source: Discovery and Development of a Potent LIMK2 Isoform-Specific Degrader · DOI · quote verified

When is Dmax reached?

About 60 h after PROTAC treatment, with complete EGFP–LIMK2 loss.

Source: Discovery and Development of a Potent LIMK2 Isoform-Specific Degrader · DOI · quote verified

What structural idea explains isoform specificity?

More stable ternary complex and lysine accessibility on LIMK2 versus LIMK1.

Source: Discovery and Development of a Potent LIMK2 Isoform-Specific Degrader · DOI · quote verified